Cannot import OMP-based library on mac osx by installing thorugh pip #217
Description
Hello i'm trying to install dtaidistance library but it keeps on failing. After reading some other (solved) bugs i decided to create a new ticket as the solutions provided were not able to solve it. When i install dtaidistance through pip it seems installed but when i test the installation i throws the following error:
Python 3.10.14 (main, Mar 19 2024, 21:46:16) [Clang 15.0.0 (clang-1500.3.9.4)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
import dtaidistance.dtw as dtw
dtw.try_import_c()
Cannot import OMP-based library (dtw_cc_omp)
Cannot import Numpy-based library (dtw_cc_numpy)
Not all libraries are available in your installation.
You can rerun the compilation from source or pip install in verbose mode:
pip install -vvv --upgrade --force-reinstall --no-deps --no-binary dtaidistance dtaidistance
In case you need to use an older version of numpy, compile against your current installation:
pip install -vvv --upgrade --force-reinstall --no-deps --no-build-isolation --no-binary dtaidistance dtaidistance
Share the following information when submitting a bug report:
== Packages ==
- Cannot import OMP-based library (dtw_cc_omp)
- dlopen(/Users/qa/qa_projects/Site.Simulation/venv/lib/python3.10/site-packages/dtaidistance/dtw_cc_omp.cpython-310-darwin.so, 0x0002): Library not loaded: /usr/local/lib/libomp.dylib
Referenced from: <98471F9E-8556-3226-98BC-2F461A21F1D5> /Users/qa/qa_projects/Site.Simulation/venv/lib/python3.10/site-packages/dtaidistance/dtw_cc_omp.cpython-310-darwin.so
Reason: tried: '/usr/local/lib/libomp.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libomp.dylib' (no such file), '/usr/local/lib/libomp.dylib' (no such file) - Cannot import Numpy-based library (dtw_cc_numpy)
- dlopen(/Users/qa/qa_projects/Site.Simulation/venv/lib/python3.10/site-packages/dtaidistance/dtw_cc_numpy.cpython-310-darwin.so, 0x0002): Library not loaded: /usr/local/lib/libomp.dylib
Referenced from: /Users/qa/qa_projects/Site.Simulation/venv/lib/python3.10/site-packages/dtaidistance/dtw_cc_numpy.cpython-310-darwin.so
Reason: tried: '/usr/local/lib/libomp.dylib' (no such file), '/System/Volumes/Preboot/Cryptexes/OS/usr/local/lib/libomp.dylib' (no such file), '/usr/local/lib/libomp.dylib' (no such file) - Numpy version: 1.23.4
- Matplotlib version: 3.6.3
- Scipy version: 1.10.1
== System information ==
namespace(name='cpython', cache_tag='cpython-310', version=sys.version_info(major=3, minor=10, micro=14, releaselevel='final', serial=0), hexversion=50990832, _multiarch='darwin')
== Compilation information ==
Compiler type: unix
--noopenmp: 0
--forceopenmp: 0
--noxpreprocessor: 0
--forcellvm: 0
--forcegnugcc: 0
--forcestatic: 0
Cython found (during compilation) - Version: 3.0.10
- Locations: <module 'Cython' from '/private/var/folders/dm/88b38gj92jj53dgxdsm12qf00000gn/T/build-env-2os_lx3p/lib/python3.10/site-packages/Cython/init.py'>
Numpy found (during compilation): - Version: 1.26.4
- Location: <module 'numpy' from '/private/var/folders/dm/88b38gj92jj53dgxdsm12qf00000gn/T/build-env-2os_lx3p/lib/python3.10/site-packages/numpy/init.py'>
Using LLVM settings (clang)
Checking for OpenMP availability for clang
clang -dM -E -Xpreprocessor -fopenmp - # with stdout=-1, stderr=-1, input=, encoding=ascii
#define _OPENMP 201811
... found OpenMP
All extensions:
[<setuptools.extension.Extension('dtaidistance.dtw_cc') at 0x1056a7af0>, <setuptools.extension.Extension('dtaidistance.ed_cc') at 0x105813d60>, <setuptools.extension.Extension('dtaidistance.dtw_cc_omp') at 0x1058182b0>, <setuptools.extension.Extension('dtaidistance.dtw_cc_numpy') at 0x105819cf0>]
==
False
I tried several things also upgraded gcc (for what it is worth)... when i installed it through conda it did work but still i need to be able to install it through pip