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Remove -C from bach in nextflow.config #39

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Jun 26, 2025
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Remove -C from bach in nextflow.config #39

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1 change: 0 additions & 1 deletion nextflow.config
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Original file line number Diff line number Diff line change
Expand Up @@ -206,7 +206,6 @@ env {
// Set bash options
process.shell = [
"bash",
"-C", // No clobber - prevent output redirection from overwriting files.
"-e", // Exit if a tool returns a non-zero status/exit code
"-u", // Treat unset variables and parameters as an error
"-o", // Returns the status of the last command to exit..
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