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minimap2 update to 2.30 #7388

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minimap2 update to 2.30 #7388

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@bgruening
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@bgruening bgruening commented Oct 25, 2025 •
edited by SaimMomin12
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FOR CONTRIBUTOR:

  • I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • License permits unrestricted use (educational + commercial)
  • This PR adds a new tool or tool collection
  • This PR updates an existing tool or tool collection
  • This PR does something else (explain below)

Closes: #6928

@bernt-matthias
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Should we add new presets and parameters? https://github.com/lh3/minimap2/releases

@SaimMomin12
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Can we also have some additional tests for the newly added parameters?

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@SaimMomin12 SaimMomin12 SaimMomin12 approved these changes

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@bgruening @bernt-matthias @SaimMomin12