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Participants
        Marjan Sadeghi edited this page Dec 9, 2017 
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    | Name | GitHub ID | Institution | Interests & Skills | 
|---|---|---|---|
Anne Thessen  
 | 
Ronin Institute for Independent Scholarship | machine learning, semantic traits, analysis of large data sets, text mining | |
| Annika Smith | Florida Museum of Natural History, University of Florida | floral evolution, computable phenotypes, plant ontologies, phylogenies | |
Austin Meier  
 | 
austinmeier | Oregon State University | Remote sensing, IoT, automated phenotyping, image analysis, ontologies and data standards. | 
| Ben Redelings | bredelings | Duke University | |
Claus Weiland  
 | 
cp-weiland | Senckenberg Biodiversity and Climate Research Institute (S-BIKF) | Flora Phenotype Ontology, plant trait semantics, machine learning of multi-modal plant data | 
Emily Jane McTavish  
 | 
snacktavish | UC Merced | phylogenetics using genomic data, automated phylogenetic updating, Open Tree of Life | 
| Ethan Smith | ethansmith | Biomimicry Institute | Bio-inspired design, innovation, ux, frontend design/development | 
Gaurav Vaidya  
 | 
gaurav | University of Colorado Boulder; Florida Museum of Natural History | Phyloreferencing, Wikipedia, concept taxonomy, taxonomic checklists | 
Guanyang Zhang  
 | 
Florida Museum of Natural History, University of Florida | Phyloreferencing, insect systematics, bacterial endosymbionts, comparative biology | |
Hilmar Lapp  
 | 
hlapp | Duke University | Phenoscape, computable semantics for analysis of trait evolution (SCATE), APIs, RPhenoscape, Phyloreferencing, machine reasoning | 
István Mikó  
 | 
teleaslamellatus | Pennsylvania State University | curator of the Hymenoptera Anatomy Ontology, insect morphology, insect taxonomy, phylogenetics, functional genomics, microscopy "Know your insect" | 
Jim Balhoff  
 | 
RENCI - UNC Chapel Hill | Phenoscape developer, semantic tools for Monarch Initiative & Gene Ontology, semantic traits, ontology development tools, machine reasoning | |
| Josef Uyeda | Virginia Tech | Phylogenetic comparative methods development and trait evolution. Interested in developing comparative methods that can use phenotypic ontologies to improve inferences. | |
| Julie Baker Phillips | Cumberland University | using public data repositories to address research questions in evolutionary medicine, interested in creating teaching modules primarily for use in undergraduate classrooms | |
Laurel Cooper  
 | 
cooperl09 | Oregon State University | Planteome Project, plant ontologies, phenotypes, traits, morphology, data standards | 
Lorena Endara  
 | 
clendara | Department of Biology - University of Florida | phenotypic traits, character evolution, systematics, phylogenetics, orchids, flagellate plants, Natural Language Processing | 
| Marjan Sadeghi | MarjanSadeghi8 | Florida State University | I am interested in Scientific Computing, Phylogenetics, and Neural Networks. | 
| Mark Holder | Univ. Kansas | ||
Martha Kandziora   
 | 
blubbundbla | UC Merced - School of Natural Science | historical biogeography, phylogenetics, using public databases for evolutionary research | 
| Matt Collins | U. Florida & iDigBio, Gainesville | computing infrastructure like Spark, data mining of large datasets, workforce development | |
Matt Yoder  
 | 
mjy | University of Illinois, INHS, Species File Group | Biodiversity informatics. Anatomy ontologies. TaxonWorks. Github. Twitter. Hymenoptera systematics. | 
Pasan Fernando  
 | 
Department of Biology, University of South Dakota | Integration of Phenoscape data with Open Tree phylogenies, Large-scale integration of ontology data, Machine learning. | |
Scott Chamberlain  
 | 
sckott | rOpenSci | software (esp. R, Python, Ruby), web APIs | 
Sergei Tarasov  
 | 
Nat. Inst. for Mathematical and Biological Synthesis (NIMBioS), Univ. of Tennessee | integration of ontologies and phylogenetic methods, semantic descriptions, insect systematics | |
| Shameer Khader | Northwell Health | ||
Todd Vision  
 | 
tjv | UNC Chapel Hill | Connecting evolutionary phenotypes to phylogenetic and genomic resources | 
Wasila Dahdul  
 | 
wdahdul | U. South Dakota | Phenoscape, SCATE, phenotype ontologies, data curation, vertebrate morphology and evolution | 
Zhiliang Hu  
 | 
Iowa State University | Developer of Animal QTLdb and CorrDB; Interested in web tools for trait ontology developments, user-end data scrutinizations; and management of trait hierarchies with modifiers. | |
Rebecca Tarvin  
 | 
University of Texas at Austin | evolutionary biology, scicomm, biocomputing | 
Organizers are in bold. Melissa Haendel 
Sponsored by Phenoscape, a project funded by NSF grants DBI-1062404 and DBI-1062542. Phenoscape was incubated and supported by the National Evolutionary Synthesis Center (NESCent), NSF EF-0905606.
