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Participants
Matt edited this page Dec 8, 2017
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Name | GitHub ID | Institution | Interests & Skills |
---|---|---|---|
Anne Thessen |
Ronin Institute for Independent Scholarship | machine learning, semantic traits, analysis of large data sets, text mining | |
Annika Smith | Florida Museum of Natural History, University of Florida | floral evolution, computable phenotypes, plant ontologies, phylogenies | |
Austin Meier | Oregon State University | ||
Ben Redelings | bredelings | Duke University | |
Claus Weiland |
Senckenberg Biodiversity and Climate Research Institute (S-BIKF) | Flora Phenotype Ontology, plant trait semantics, machine learning of multi-modal plant data | |
Emily Jane McTavish |
snacktavish | UC Merced | phylogenetics using genomic data, automated phylogenetic updating, Open Tree of Life |
Ethan Smith | Biomimicry Institute | Bio-inspired design, innovation, ux, frontend design/development | |
Gaurav Vaidya |
gaurav | University of Colorado Boulder; Florida Museum of Natural History | Phyloreferencing, Wikipedia, concept taxonomy, taxonomic checklists |
Guanyang Zhang |
Florida Museum of Natural History, University of Florida | Phyloreferencing, insect systematics, bacterial endosymbionts, comparative biology | |
Hilmar Lapp |
Duke University | Phenoscape, computable semantics for analysis of trait evolution (SCATE), APIs, RPhenoscape, Phyloreferencing, machine reasoning | |
István Mikó |
teleaslamellatus | Pennsylvania State University | curator of the Hymenoptera Anatomy Ontology, insect morphology, insect taxonomy, phylogenetics, functional genomics, microscopy "Know your insect" |
Jim Balhoff |
RENCI - UNC Chapel Hill | Phenoscape developer, semantic tools for Monarch Initiative & Gene Ontology, semantic traits, ontology development tools, machine reasoning | |
Josef Uyeda | Virginia Tech | Phylogenetic comparative methods development and trait evolution. Interested in developing comparative methods that can use phenotypic ontologies to improve inferences. | |
Julie Baker Phillips | Cumberland University | using public data repositories to address research questions in evolutionary medicine, interested in creating teaching modules primarily for use in undergraduate classrooms | |
Laurel Cooper |
cooperl09 | Oregon State University | Planteome Project, plant ontologies, phenotypes, traits, morphology, data standards |
Lorena Endara |
clendara | Department of Biology - University of Florida | phenotypic traits, character evolution, systematics, phylogenetics, orchids, flagellate plants, Natural Language Processing |
Marjan Sadeghi | Florida State University | I am interested in Scientific Computing, Phylogenetics, and Neural Networks. | |
Mark Holder | Univ. Kansas | ||
Martha Kandziora |
UC Merced - School of Natural Science | historical biogeography, phylogenetics, using public databases for evolutionary research | |
Matt Collins | U. Florida & iDigBio, Gainesville | computing infrastructure like Spark, data mining of large datasets, workforce development | |
Matt Yoder |
mjy | University of Illinois, INHS | |
Pasan Fernando | Department of Biology, University of South Dakota | ||
Scott Chamberlain |
sckott | rOpenSci | software (esp. R, Python, Ruby), web APIs |
Sergei Tarasov |
Nat. Inst. for Mathematical and Biological Synthesis (NIMBioS), Univ. of Tennessee | integration of ontologies and phylogenetic methods, semantic descriptions, insect systematics | |
Shameer Khader | Northwell Health | ||
Todd Vision |
tjv | UNC Chapel Hill | Connecting evolutionary phenotypes to phylogenetic and genomic resources |
Wasila Dahdul |
U. South Dakota | Phenoscape, SCATE, phenotype ontologies, data curation, vertebrate morphology and evolution | |
Zhiliang Hu |
Iowa State University | Developer of Animal QTLdb and CorrDB; Interested in web tools for trait ontology developments, user-end data scrutinizations; and management of trait hierarchies with modifiers. | |
Rebecca Tarvin |
University of Texas at Austin | evolutionary biology, scicomm, biocomputing |
Organizers are in bold. Melissa Haendel (OHSU) is a co-organizer, but unable to attend in person.
Sponsored by Phenoscape, a project funded by NSF grants DBI-1062404 and DBI-1062542. Phenoscape was incubated and supported by the National Evolutionary Synthesis Center (NESCent), NSF EF-0905606.