DOLfYN IO (#126)

* input output files
+ testing

* Code update

* Test reformatting

* Testing paths

* dependency switch from h5netcdf to netcdf4

* Code cleanup

* Test import fix

* Minor docstring edits

* Add dolfyn test data

* Test fixes for mhkit

* Removing uneeded test files, improving consistency

* Not sure why these files didn't upload

* Organizational changes and clarifications. Request for additional clarification

* Dolfyn codebase updates

* Dolfyn example notebooks update

* Testing updates

* Update example datafile

* Latest dolfyn v0.13.0 updates

* Name change

* input output files
+ testing

* Code update

* Organizational changes and clarifications. Request for additional clarification

* Dolfyn codebase updates

* fix bug and make faster. Un-hard-code default seed/phase.

* fix tests

* delete commented out tests

* retrigger checks

* Checkpoint push

* New dolfyn data files

* Reorganize dolfyn testing

* pytest install for warnings tests

* Final update for IO

* Remove future updates

* Ensure file compression runs

* Update numpy dependency

* trying numpy v1.22

* changing numpy requirements

* Remake unittest test cases

* Save format options

* Add dolfyn view to notebooks

* Decode remaining binary ad2cp variables

* DOLfYN 1.0.0 dependency

Co-authored-by: jmcvey3 <[email protected]>
Co-authored-by: ssolson <[email protected]>
Co-authored-by: Michelen <[email protected]>
Co-authored-by: jmcvey3 <[email protected]>
Co-authored-by: rpauly18 <[email protected]>

Author: 4 people

.github/workflows/main.yml

@@ -31,6 +31,7 @@ jobs:
         python -m pip install --upgrade pip wheel
         pip install h5pyd --upgrade
         pip install nose
+        pip install pytest
         pip install coveralls
         pip install .
         

.gitignore

@@ -27,6 +27,7 @@ $ cat .gitignore
 .DS_Store
 .DS_Store?
 .gitignore
+.vscode
 
 # Exemptions
 !**/examples/data/wave/*.mat